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AT5G38240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.551
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AB005247
EMBL:CP002688EnsemblPlants:AT5G38240EnsemblPlants:AT5G38240.1entrez:833806
Gene3D:2.60.120.200GeneID:833806GO:GO:0004672GO:GO:0004674
GO:GO:0005524GO:GO:0016021GO:GO:0030247Gramene:AT5G38240.1
hmmpanther:PTHR27009hmmpanther:PTHR27009:SF21InParanoid:F4KA50InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR025287KEGG:ath:AT5G38240OMA:MQNISESPaxDb:F4KA50
Pfam:PF00069Pfam:PF13947Pfscan:PS50011PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4KA50Proteomes:UP000006548
RefSeq:NP_198640.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
STRING:3702.AT5G38240.1SUPFAM:SSF56112TAIR:AT5G38240UniGene:At.55212
UniProt:F4KA50
Coordinates (TAIR10) chr5:-:15277239..15279317
Molecular Weight (calculated) 65051.90 Da
IEP (calculated) 5.64
GRAVY (calculated) -0.04
Length 588 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYLSSMGSQ TARFCLILLF LFYYLPCALS QDDLWGCGTP FRCGNITAGF PFLGGIRGEV CGHHSLKLNC NKHSNTTSLI FSGHNYTVLY IDNNNNSVTL
101: GLSRQDFSGP FCSASFSSTL LSSGLFQNLP SYKSLTVFYA CDPRRHFLGN FTCPVKGLGS IIQNSTYGIL CDGSFSVPVP TSFVSEEEVL DLTHLESVLR
201: KGFEVKLNID EIPCPLECFS SRANCLFLAG SCCKYHDRTT TCGGDTGDLL RESMILLFAM FFISPLIVAE IIPNTRSILI TIGQEVVGRG GFGTVYKGNL
301: RDGRKVAVKI LKDSNGNCED FINEVASISQ TSHVNIVSLL GFCFEKSKRA IVYEFLENGS LDQSSNLDVS TLYGIALGVA RGIEYLHFGC KKRIVHFDIK
401: PQNVLLDENL KPKVADFGLA KLCEKQESIL SLLDTRGTIG YIAPELFSRV YGNVSHKSDV YSYGMLVLEM TGARNKERVQ NADSNNSSAY FPDWIFKDLE
501: NGDYVKLLAD GLTREEEDIA KKMILVGLWC IQFRPSDRPS MNKVVGMMEG NLDSLDPPPK PLLHMPMQNN NAESSQPSEE DSSIYSEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)