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AT5G38195.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G38197.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JH96eggNOG:ENOG410Z1B5EMBL:BT024655EMBL:CP002688
EMBL:DQ447010EnsemblPlants:AT5G38195EnsemblPlants:AT5G38195.1entrez:833801
GeneID:833801GO:GO:0008233Gramene:AT5G38195.1hmmpanther:PTHR33214
hmmpanther:PTHR33214:SF7InterPro:IPR016140KEGG:ath:AT5G38195OMA:AQCNPEQ
Pfam:PF14368PhylomeDB:Q29QA1Proteomes:UP000006548RefSeq:NP_568555.1
SMART:SM00499SMR:Q29QA1SUPFAM:SSF47699TAIR:AT5G38195
UniGene:At.30427UniProt:Q29QA1
Coordinates (TAIR10) chr5:+:15246991..15247278
Molecular Weight (calculated) 10409.10 Da
IEP (calculated) 7.60
GRAVY (calculated) 0.46
Length 95 amino acids
Sequence (TAIR10)
(BLAST)
1: MKFMKLMVIT VVIVVMSSPI LIKSEVSSSC IPTELMPCLP AMTTGGQPTK DCCDKLIEQK ECLCGYINNP LYSTFVSSPV ARKVLEVCNI PYPSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)