AT5G37530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: co-factor for nitrate, reductase and xanthine dehydrogenase 5 (TAIR:AT5G55130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:14906505..14909020 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50562.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.08 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||
| Length | 457 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEKSKYLSL VGAGALIGSI STVALLKLLS RSSLKQLNEN PETNFLAGNG IESETRPDTV ANGQDLLKDE IVSEHLTRNI QFFGLESQHK VTGSYVVVIG 101: LGGVGSHAAS MLLRSGVGKL LLVDFDQVSL SSLNRHAVAT RADVGIPKAM CLKKHFSSIF PECHIEAKVM LYDSSSEEEI LSGKPDFVLD CIDNIDTKVG 201: LLAACVKRGL KVLSATGAGA RADPTRIRVA DIRESTIDPL SRSVRHRLRR KHGIEGGIPV VFSLEKPKAK LLPFEGTNGE DENPLDYQVV PGFRVRIIPV 301: LGTIPAIFGQ IMASYVITQL AGVQVQMEPI VNLDLDHYRL LHQRLIEHEE TVYGTSAEVE VDVEEVMYIV KELWHGRSAR DETAKDVGRG MWRAMNELML 401: VRWDAKKPAT VSNLVLLKFK EADEHETKTL EEVKESETEF FERVSCVLKK AELDFYG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)