AT5G37350.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.998 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Serine/threonine-protein kinase Rio1 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), Serine/threonine-protein kinase Rio1 (InterPro:IPR017407), RIO kinase (InterPro:IPR000687), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12159 Blast hits to 6760 proteins in 774 species: Archae - 403; Bacteria - 825; Metazoa - 4615; Fungi - 1188; Plants - 588; Viruses - 131; Other Eukaryotes - 4409 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:14793037..14795828 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 60323.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.49 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 531 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEEVVVVAEP PPKITPFVEY EEELEDDDDD LSLSSDSDIA EALDWLDGKD DDELIGGGFS LHARRPNAHG GHGSRPNSSA LQPISNKAQK LTSHVRASPL 101: EGWEGRVKVG MSNSVTTAIR GSLRDTEIGR SRNTDKADRA TVEQALDPRT RMVLFRMLNR GVFNDVNGCI STGKEANVYH ATKSDGSELA IKVYKTSVLV 201: FKDRDRYVQG DYRFRYGYCR HNPRKMVKTW AEKEQRNLKR LHAAGIRCPA VILLRLHVLV MEFIGRDGWA APRLKDAALS LDKLRECYLE LIIQMRVLYQ 301: KCKLVHGDLS EYNILYFEGH LYIIDVSQSV DLDHPLALNF LREDCDHVSD FFKKHGVAVM TIRELFDFIV DPTISDENVD SYLEEVQRKV IERGEISVED 401: EIADSVFMKS YIPKSLDAVN NPEADVAKIT SGQDTGDMLY QTITGLKDAL PKVDEQQIEV NAEEEEEEEE EGSGEESEEE SEKELGPEDK KAARKEHKKK 501: VKEEKRESRK TKTPKSVKKR KKKVSKPHKT R |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)