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AT5G37350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Serine/threonine-protein kinase Rio1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), Serine/threonine-protein kinase Rio1 (InterPro:IPR017407), RIO kinase (InterPro:IPR000687), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12159 Blast hits to 6760 proteins in 774 species: Archae - 403; Bacteria - 825; Metazoa - 4615; Fungi - 1188; Plants - 588; Viruses - 131; Other Eukaryotes - 4409 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G37350-MONOMEREC:2.7.11.1eggNOG:COG1718eggNOG:KOG2270
EMBL:AB017069EMBL:AK176847EMBL:AK176910EMBL:CP002688
EnsemblPlants:AT5G37350EnsemblPlants:AT5G37350.1entrez:833709ExpressionAtlas:Q9FHT0
GeneID:833709GO:GO:0004674GO:GO:0005524Gramene:AT5G37350.1
hmmpanther:PTHR10593hmmpanther:PTHR10593:SF23InterPro:IPR000687InterPro:IPR011009
InterPro:IPR017407InterPro:IPR018935KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1
ncoils:CoilOMA:WHETLKVPANTHER:PTHR10593:SF23Pfam:PF01163
PhylomeDB:Q9FHT0PIRSF:PIRSF038147PROSITE:PS01245Proteomes:UP000006548
RefSeq:NP_851100.1scanprosite:PS01245SMART:SM00090SMR:Q9FHT0
STRING:3702.AT5G37350.1SUPFAM:SSF56112TAIR:AT5G37350UniGene:At.30494
UniProt:Q9FHT0
Coordinates (TAIR10) chr5:+:14793037..14795828
Molecular Weight (calculated) 60323.30 Da
IEP (calculated) 5.49
GRAVY (calculated) -0.69
Length 531 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEVVVVAEP PPKITPFVEY EEELEDDDDD LSLSSDSDIA EALDWLDGKD DDELIGGGFS LHARRPNAHG GHGSRPNSSA LQPISNKAQK LTSHVRASPL
101: EGWEGRVKVG MSNSVTTAIR GSLRDTEIGR SRNTDKADRA TVEQALDPRT RMVLFRMLNR GVFNDVNGCI STGKEANVYH ATKSDGSELA IKVYKTSVLV
201: FKDRDRYVQG DYRFRYGYCR HNPRKMVKTW AEKEQRNLKR LHAAGIRCPA VILLRLHVLV MEFIGRDGWA APRLKDAALS LDKLRECYLE LIIQMRVLYQ
301: KCKLVHGDLS EYNILYFEGH LYIIDVSQSV DLDHPLALNF LREDCDHVSD FFKKHGVAVM TIRELFDFIV DPTISDENVD SYLEEVQRKV IERGEISVED
401: EIADSVFMKS YIPKSLDAVN NPEADVAKIT SGQDTGDMLY QTITGLKDAL PKVDEQQIEV NAEEEEEEEE EGSGEESEEE SEKELGPEDK KAARKEHKKK
501: VKEEKRESRK TKTPKSVKKR KKKVSKPHKT R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)