AT5G37150.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:14701330..14704562 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 95069.60 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 8.23 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||
Length | 839 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEQNEKTSLV DRVFSWSIKD ILNKDFYKQK TVPDKFRSVD EYYQCFVPHL LIEAHTELFS SLKSVSKSPF VQIRSMETKT KQSSGSSSNK LFYDITLKAT 101: ESLSAKYQPK CGDLIALTMD KPRRINDLNP LLLAYVFSSD GDLKISVHLS RSISPLENYS FGVFLMTLTT NTRIWNALHN EAAISTLTKS VLQANTVNNV 201: FVLKMMGDLT LFLDIIRSTK LNSSQEDAIL GCLETRNCTH KNSVKLIWGP PGTGKTKTVA TLLFALLKLR CKTVVCAPTN TAIVQVASRL LSLFKENSTS 301: ENATYRLGNI ILSGNRDRMG IHKNDHVLLD VFLDERIGKL GKLFSPFSGW MQRLESLIQF LENPEGKYER HVYELEEVER MEEEAERQEV VVNIPTIGEF 401: VKKNFNSLSE EVETCIVDLF THLPKVYLPY DDVKIMIASR QSLQRIRYFL RENSSRVDFE EGNFRFDCFK RLSVDCLKAL RLLPKRFEIP DMLENEDIRK 501: FCLQNADIIL CTASGAAEMN VERTGNVELL VVDEAAQLKE CESVAALQLP GLRHAILIGD EFQLPAMVHN EMCEKAKFGR SLFERLVLLG HNKHLLDVQY 601: RMHPSISRFP NKEFYGGRIK DAENVKESIY QKRFLQGNMF GSFSFINVGR GKEEFGDGHS PKNMVEVAVV SEIISNLFKV SCERRMKVSV GVVSPYKGQM 701: RAIQEKIGDK YSSLSGQQFA LNVRSVDGFQ GGEEDIIIIS TVRSNSNGKV GFLNNRQRAN VALTRARHCL WVIGNETTLA LSGSIWATLI SESRTRGCFY 801: DATDEMNLRN AMNEALLEDV SSSLGSLSIR NGHGRRNVW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)