AT5G37140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G52090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:14690436..14692851 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77296.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.71 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||
| Length | 692 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDHQFKETSL QFGVFLMNLT TNTRIWNALH NEAANSTLIK SVLQENTLTT EQCVCESGAH GSDRVTNIIR SAKLNSSQEA AILSCLKIRN CNHKHSVKLI 101: WGPPGTGKTK TVATLLFCLL KLSCKTVVCA PTNTAIVEVT SRLLSLFKTS SSEHSTYGLG NIVLSGNQAR MGIKENDVLL DVFLDERIGI LTSLFSPTSG 201: WKQRLESLID FLENTEAKYE HYVHLLKEVE RMSEEAEKKK KGADKKPKAI KILTFGEFVK KTFDGFSEEL EKGMVDLWTH LPKSFITSEN VKSMVTARKA 301: LQRVRYFLKE NFSRDDFKKG SLKFDCFNGV SAYCLQILRL LPERFEVSDM LENNDTKTFC LQNADIIFCT ASGAADMNPI RTGSVDLLVV DEAAQLKECE 401: SVAALQLSGL RHAVLIGDEL QLPAMVHNEA KFGRSLFERL VLLGHNKHLL NVQYRMHPSI SRFPNKEFYG GRIKDAANVQ ESIYQKRFLQ GNMFGSFSFI 501: NVGRGEEEFG DGHSPKNMVE VAVISEIISN LFKVSSERRI KMSVGVVSPY KGQVRAIQER TTNKYSSLSG LFTLNVRSVD GFQGGEEDII IISTVRSNGN 601: GKVGFLNNRQ RANVALTRAR HCLWVIGNET TLALSGSSWA KLISESRTLG CFYDAADEKN LRDAMNEALL EDVSTSFGSL SIRNGYGKRN AW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)