AT5G37030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.959 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Helicase domain, viral-like (InterPro:IPR000606); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G37150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14634614..14636939 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72065.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.68 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 638 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERNEKTSLL DRIFSWSMED ILNKDLYKQK IKTIPDKFSS VNEYLKCFVP HLLEETRTEL STSFKSLSKA HLFEISSLET MTKESSGSLS NKLFYDMSIN 101: DALSIREKYQ PKCGDLIALT KERPRGVDDL NPLLLGSISV DTYPNISVIL SRLIFHDEKK SLGFAPNFDL IQSVLQPNTA GMEPIVSSRT WGQNVLDIIR 201: SSKLNSSQEA AILSCLETRD SNHKNSVKLI WGPLKTKTVA TLLLVLLKLR CKTVVCAPTN TAIVEVTSRL LALSNKYSEH ATYGLGNIFL AGNQKRMRIK 301: DTDYLRNVFL DHRISKLRKL FLSTCGWKQS LESIIDLLEN TETKTGNIEV LVVDEAAQLK ECESVAALQL PGLRHAILIG DEFQLPAMVH NDQCEKAKFG 401: RSLFERLVLL GHKKHLLDVQ YRMHPSISRF PYKEFYGGRI KDAANVQESI YQKRFLQGNM FGSFSFINVG RGKEEFGDGD SPKNMVEVAV VSEIISNLFK 501: VSRERKMKMS VGVITPYKGQ VRAIQERIRD KYSSLSGELF TVNVRSVDGF QGGEEDIIII STVRSNSNGK VGFLSNRQRA NVALTRARHC LWVIGNESTL 601: ARSGSIWANL ISDSKRRKCF YDAKDDKRLR DAMNAVQG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)