AT5G35380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT2G07020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:13593429..13596293 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81857.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.94 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 731 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRTSEKREE NITLAIDRDK ESQNALKWAV SNLLSRGQTL TLLHVKLKQP SSLPYSGSNF SKPGDDPSEL FLPFRCYCAR KDINCQDVVV EDVSAAKGIV 101: DYVQQNAIET LILGSSKMTL LRFKAADVSS TVMKKAPSFC TVYVISKGKI SFLRSATSSP PHSNMPSMRH HSHAQTSNMN VERRQQTMQR THDEIKIEIK 201: RGYEGVYQPS ITDSDISFVS SGRPSVDQMF PSLYDDVDVP RLSVTSEYGE NRLSFATTYS KQSIDLGSPY APNSSTSFES GRQSFSLQGQ DELETEMRRL 301: KMELKHTMEM YNSACKEAIS AKKAANELLK WKAEKEHKLE EVRLSKEAAM AMAEREKEKS RAAMEAAVAA QKLSDLEAEK RKHIETVDEK KRAVSSLRYR 401: KYTIEEIEEA TEDFSPSRKV GEGGYGPVYK GTLDYTKVAI KVLRPDAAQG RSQFQREVEV LTCMRHPNMV LLLGACPEYG CLVYEYMANG SLDDCLFRRG 501: NSPILSWQLR FRIASEIATG LHFLHQMKPE PLVHRDLKPG NILLDQHFVS KISDVGLARL VPPSVADTAT QYRMTSTAGT FFYIDPEYQQ TGMLGTKSDI 601: YSFGIMLLQI LTAKPPMGLT HHVEKAIEKG TFAEMLDPAV PDWPFEEALA AAKLALQCAK LRRKDRPDLG NIVLPELKKL RDLAEESIKF GVRQPSPIRS 701: SGSATSIQEI ISDPQLQYGS DSSSLHNSST S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)