AT5G34780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Putative ketopantoate reductase (KPR). This enzyme is speculated to be the missing enzyme in the biosynthesis of pantothenate. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 2-dehydropantoate 2-reductase activity; INVOLVED IN: pantothenate biosynthetic process, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 8440 Blast hits to 8438 proteins in 1755 species: Archae - 123; Bacteria - 5526; Metazoa - 482; Fungi - 237; Plants - 202; Viruses - 0; Other Eukaryotes - 1870 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:12961682..12963892 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41603.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 365 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESRCKKGYF RLAVIGLSKA KDCWEKNACA VTFIGDGGTS EGDFHAGLNF AAVMEAPVVF ICRNNGWAIS THISEQFRSD GIVVKGQAYG IRSIRVDGND 101: ALAVYSAVCS AREMAVTEQR PVLIEMMIYR VGHHSTSDDS TKYRAADEIQ YWKMSRNSVN RFRKSVEDNG WWSEEDESKL RSNARKQLLQ AIQAAEKWEK 201: QPLTELFNDV YDVKPKNLEE EELGLKELIE KQPQDYMMLK ELIPNWILGI GTLALRYDFQ ETLFNGWHAI AELQQLKLKI KLNSLLNDQA DTESLKAARN 301: SALNVIQAMI IHLVLTLKGR FSLPLTEETV RFNEPIQLNQ NMVKDGGYTA ELFPIRKEEQ GEVRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)