AT5G27410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:9678821..9682468 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62899.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.36 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||
| Length | 559 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVIHAWSAP RSLSTTLMYS FAQRDDIEVL DEPLYAAFLK STGVDRPYKD ELLSKMECDG EKVVKDIIYG PGKKKYRFCK HISKQRLLGL PSELMSEGKH 101: FILIRNPLNI LPSFEKIHPS SFHELGLGEL VSIYSDLCQM GTPPAIIDAD ELQRDPEATL RSLCDDLEIP FQASMLKWEA GPIPEDGLWA PWWYETLHKS 201: TGFSSPQKYP QTFPLMHYDL LEQCLPLYNI LRCHMKHKSS LLSSTLPPPS LPVPENAKLL AWVGDEIVPR EMAKVSVFDS VVQGGDSVWE GLRIYKGKVF 301: KLEEHLDRLS DSAKALAFNN VPTREEIKEA IFRTLITNGM FDNTHIRLSL TRGKKVTSGM SPAFNRYGCT LIVLAEWKPP VYDNDGGIVL VTATTRRNSP 401: NNLDSKIHHN NLLNNILAKI ESNNANVDDA IMLDKDGFVS ETNATNIFMV KKDRVLTPHA DYCLPGITRA TVMELVVKEN FILEERRISL SEFHTADEVW 501: TTGTMGELSP VVKIDGRVIG EGKVGPVTRR LQNAYKKLTD GSGVPIPTYQ EVKNLEPCV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)