AT5G26150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.964 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT5G12000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:9137461..9140099 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78493.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.83 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 703 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASPYSSDDI HSPVNSTVVA IDKEKHSSYA VRWAVDHLLN MIHNPVMILV HVRTKNSNHG ANLNNDDLNQ LFIPYRGYCA RKGVVLDDSD VAKTILDYVN 101: NNLVNNLVLG ASTKNTFARS FMFSKPHEVQ SSIMKSTPDF CSVYVISKGG KVQSSRPAQR PITNTLAPPR VPSSGFLIQS LSDSEQDLIP RVQRSARNKP 201: NETTYPHNRA AFNTTQKGYK SPINGSMDFN NGFNQAAFQR NPTLQSSFSD ESDGGFGVMG SVDLSSQNSM DFYHGASSSS EESIPQSTKD IEAEMRRLKL 301: ELKQTMDMYS SACKEALTAK RKANELNQWK IEEARKFEKA RLSEEAALAV AEIEKAKCRT AVEAAEKAQR MAELEGQRRK QAEMKAVSEE KDKDRAVSAL 401: AHNDVRYRKY SIEEIEEATE RFANHRKIGE GGYGPVYNGE LDHTPVAIKV LRPDAAQGKK QFQQEVEVLC SIRHPHMVLL LGACPEYGCL VYEFMENGSL 501: EDRLFRTGNS PPLSWRKRFE IAAEIATALS FLHQAKPEPL VHRDLKPANI LLDKNYVSKI SDVGLARLVP ASIADSVTQF HMTSAAGTFC YIDPEYQQTG 601: MLTTKSDVYS LGILLLQIIT GRPPMGLAHQ VSRAISKGTF KEMLDPVVPD WPVQEAQSFA TLALKCAELR KRDRPDLGKE VVPHLIRLKN FGNDGDERTN 701: EWI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)