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AT5G26120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : alpha-L-arabinofuranosidase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha-L-arabinofuranosidase 2 (ASD2); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, alpha-N-arabinofuranosidase activity; INVOLVED IN: L-arabinose metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Alpha-L-arabinofuranosidase, C-terminal (InterPro:IPR010720), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: alpha-L-arabinofuranosidase 1 (TAIR:AT3G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G26120-MONOMERCAZy:GH51EC:3.2.1.-EC:3.2.1.55
eggNOG:COG3534eggNOG:ENOG410IK9REMBL:AF149413EMBL:AY063925
EMBL:AY243510EMBL:BT006062EMBL:CP002688EnsemblPlants:AT5G26120
EnsemblPlants:AT5G26120.1entrez:832681Gene3D:2.60.120.260GeneID:832681
Genevisible:Q8VZR2GO:GO:0005578GO:GO:0046373GO:GO:0046556
Gramene:AT5G26120.1hmmpanther:PTHR31776hmmpanther:PTHR31776:SF0HOGENOM:HOG000115340
InParanoid:Q8VZR2InterPro:IPR008979InterPro:IPR010720InterPro:IPR017853
KEGG:00520+3.2.1.55KEGG:ath:AT5G26120KO:K01209OMA:ASVITWH
PaxDb:Q8VZR2Pfam:PF06964Pfam:Q8VZR2PhylomeDB:Q8VZR2
PRIDE:Q8VZR2PRO:PR:Q8VZR2ProteinModelPortal:Q8VZR2Proteomes:UP000006548
RefSeq:NP_197984.2SMART:SM00813SMR:Q8VZR2STRING:3702.AT5G26120.1
SUPFAM:SSF49785SUPFAM:SSF51011SUPFAM:SSF51445TAIR:AT5G26120
tair10-symbols:ASD2tair10-symbols:ATASD2UniGene:At.27144unipathway:UPA00667
UniProt:Q8VZR2
Coordinates (TAIR10) chr5:-:9121835..9125399
Molecular Weight (calculated) 75443.00 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.21
Length 674 amino acids
Sequence (TAIR10)
(BLAST)
001: MDMETSWRFL RSVCLLSFIL GSFSVYQTLC LVDAQEDAIV TLQVDASNVT RRPIPETLFG IFFEEINHAG AGGLWAELVS NRGFEAGGQI IPSNIWPWSI
101: IGDESSIYVV TDRSSCFERN KIALRMEVLC DSNSCPLGGV GVYNPGYWGM NIEEGKKYKV VLYVRSTGDI DVSVSFTSSN GSVTLASENI IALASDLLNW
201: TKKEMLLEAN GTDNGARLQF TTTKKGSIWF DQVSAMPMDT YKGHGFRNDL FQMMVDLKPR FIRFPGGCFV EGDWLGNAFR WKETVRAWEE RPGHYGDVWK
301: YWTDDGLGHF EFFQLAEDLG ASPIWVFNNG ISHNDQVETK NVMPFVQEAI DGIEFARGDS NSTWGSVRAA MGHPEPFELK YVAVGNEDCF KSYYRGNYLE
401: FYNAIKKAYP DIKIISNCDA SAKPLDHPAD YFDYHIYTLA RDLFSKSHDF DNTPRNGPKA FVSEYAVNKA DAKNGNLLAA LGEAAFLLGL EKNSDIVEMV
501: SYAPLFVNTN DRRWIPDAIV FNSSHLYGTP SYWVQHFFTE SSGATLLNST LKGKTSSVEA SAISFQTNGK DYIQIKAVNF GEQSVNLKVA VTGLMAKFYG
601: SKKKVLTSAS VMDENSFSNP NMIVPQESLL EMTEQEDLMF VLPPHSFSSF DLLTESENVI KMPISDSYKK TSTM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)