AT5G25620.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Flavin-binding monooxygenase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8935312..8938200 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47443.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.74 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 426 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGKLAHDHR GMTSPRRICV VTGPVIVGAG PSGLATAACL KERGITSVLL ERSNCIASLW QLKTYDRLHL HLPKQFCELP IIPFPGDFPT YPTKQQFIEY 101: LEDYARRFDI KPEFNQTVES AAFDENLGMW RVTSVGEEGT TEYVCRWLVA ATGENAEPVV PRFEGMDKFA AAGVVKHTCH YKTGGDFAGK RVLVVGCGNS 201: GMEVCLDLCN FGAQPSLVVR DAVHVLPREM LGTSTFGLSM FLLKWLPIRL VDRFLLVVSR FILGDTTLLG LNRPRLGPLE LKNISGKTPV LDVGTLAKIK 301: TGDIKVCSGI RRLKRHEVEF DNGKTERFDA IILATGYKSN VPSWLKENKM FSKKDGFPIQ EFPEGWRGEC GLYAVGFTKR GISGASMDAK RIAEDIHKCW 401: KQDEQLQCKL GKRMKRKFSE SDCGGN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)