AT5G25310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G03795.1); Has 1327 Blast hits to 1319 proteins in 106 species: Archae - 0; Bacteria - 6; Metazoa - 283; Fungi - 4; Plants - 949; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:8784820..8787235 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55977.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.22 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||||||
| Length | 480 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDKFQSKFTR FGFISICFGS IALVLLISHC STSFFDYSFQ KFKFSFPEET ELRRNVYTSS SGEENRVVVD SRHVSQQILT VRSTNSTLQS KPEKLNRRNL 101: VEQGLAKARA SILEASSNVN TTLFKSDLPN SEIYRNPSAL YRSYLEMEKR FKVYVYEEGE PPLVHDGPCK SVYAVEGRFI TEMEKRRTKF RTYDPNQAYV 201: YFLPFSVTWL VRYLYEGNSD AKPLKTFVSD YIRLVSTNHP FWNRTNGADH FMLTCHDWGP LTSQANRDLF NTSIRVMCNA NSSEGFNPTK DVTLPEIKLY 301: GGEVDHKLRL SKTLSASPRP YLGFFAGGVH GPVRPILLKH WKQRDLDMPV YEYLPKHLNY YDFMRSSKFC FCPSGYEVAS PRVIEAIYSE CIPVILSVNF 401: VLPFTDVLRW ETFSVLVDVS EIPRLKEILM SISNEKYEWL KSNLRYVRRH FELNDPPQRF DAFHLTLHSI WLRRLNLKLT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)