AT5G24910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 714, subfamily A, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP714A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 714, subfamily A, polypeptide 1 (CYP714A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 714, subfamily A, polypeptide 2 (TAIR:AT5G24900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8567674..8570260 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60338.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 532 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENFMVEMAK TISWIVVIGV LGLGIRVYGK VMAEQWRMRR KLTMQGVKGP PPSLFRGNVP EMQKIQSQIM SNSKHYSGDN IIAHDYTSSL FPYLDHWRKQ 101: YGRVYTYSTG VKQHLYMNHP ELVKELNQAN TLNLGKVSYV TKRLKSILGR GVITSNGPHW AHQRRIIAPE FFLDKVKGMV GLVVESAMPM LSKWEEMMKR 201: EGEMVCDIIV DEDLRAASAD VISRACFGSS FSKGKEIFSK LRCLQKAITH NNILFSLNGF TDVVFGTKKH GNGKIDELER HIESLIWETV KERERECVGD 301: HKKDLMQLIL EGARSSCDGN LEDKTQSYKS FVVDNCKSIY FAGHETSAVA VSWCLMLLAL NPSWQTRIRD EVFLHCKNGI PDADSISNLK TVTMVIQETL 401: RLYPPAAFVS REALEDTKLG NLVVPKGVCI WTLIPTLHRD PEIWGADANE FNPERFSEGV SKACKHPQSF VPFGLGTRLC LGKNFGMMEL KVLVSLIVSR 501: FSFTLSPTYQ HSPVFRMLVE PQHGVVIRVL RQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)