AT5G24760.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GroES-like zinc-binding dehydrogenase family protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8495035..8497090 | ||||||||||||||||||||
| Molecular Weight (calculated) | 37706.80 Da | ||||||||||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||
| Length | 352 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEVEVSPPQ PLEIRIKVVC TSLCRSDLSA WESQSLLPRI FGHEAAGIVE SIGEGVTEFE KGDHVLAVFT GECGSCRHCI SGKSNMCQVL GMERKGLMHS 101: DQKTRFSIKG KPVYHYCAVS SFSEYTVVHS GCAVKVDPLA PLHKICLLSC GVAAGLGAAW NVADVQKGSS VVIFGLGTVG LSVAQGAKLR GAAQILGVDI 201: NPAKAEQAKT FGVTDFINSN DLSEPIPQVI KRMTGGGADF SFECVGDTGI ATTALQSCSD GWGMTVTLGV PKAKPEVSAH YGLFLSGKSL KGTLFGGWKP 301: KSDLPSLIDK YMNKEIMIDE FITHNLSFDE INKAFVLMRE GKCLRCVLHM PK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)