AT5G24540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta glucosidase 31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta glucosidase 31 (BGLU31); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 32 (TAIR:AT5G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8384876..8388027 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61875.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 534 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIKLIALVI TLCVASWDVA QGRSLRFSTT PLNRYSFPPH FDFGVASSAY QYEGAVEEGG RSLSIWDNFT HAFPERTNMD NGDVAVDFYH RYKEDIKLIK 101: EMNMDSFRFS LSWSRILPSG KLSDGVNKEG VQFYKNLIDE LIENGIKPFV TIYHWDIPQA LDDEYGSFLS PRIIDDFRNY ARFCFQEFGD KVSMWTTFNE 201: PYVYSVSGYD AGNKAMGRCS KWVNSLCIAG DSGTEPYLVS HHLLLAHAAA VEEFRKCDKI SQDSKIGIVL SPYWFEPYDS ASNADKEAVE RALAFNIGWH 301: LSPLVFGDYP ETIKISAGNR LPSFTKEQSM MVKNSFDFIG VNYYTARFVA HDLNVDISRP RFMTDQHLQY KLTNRTGDTI SLESDGTKIL WSYPEGLRKI 401: LNYIKNKYNN PTIYITENGF DDYENGTVTR EEILEDTKRI EYHQKHLQEL QKAITEDGCD VKGYFTWSLL DNFEWEHGYA VRFGLYYVDY KNGLQRHAKH 501: SAMWFKHFLE RSGKPMPMDL FKSVKRWWST LQMI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)