AT5G23990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.683 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ferric reduction oxidase 5 | ||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons. | ||||||||||||||||
| Computational Description (TAIR10) |
ferric reduction oxidase 5 (FRO5); FUNCTIONS IN: ferric-chelate reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: shoot, flower; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 4 (TAIR:AT5G23980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8105565..8108590 | ||||||||||||||||
| Molecular Weight (calculated) | 74896.90 Da | ||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||
| Length | 657 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNMRSLVKM LMVVLFLGWI FVWIMISTNR FQNIWTPKLA KHESCATHGS NDVHCGSELC LFAYPKATLP NSKRMEGKRE NGEGDDGYEP IGDSDSHRVD 101: FFSVAKFRAF GLRIGYVGHY CWAFLFFPVT RASTILPLVG LTSESSIKYH IWLGHVSNFC FLVHTVVFLI YWAMVNKLME TFAWNATYVP NLAGTIAMVI 201: GIAIWVTSLP SFRRKKFEIF FYTHHLYGLY IVFYAIHVGD SWFCMILPNI FLFFIDRYLR FLQSTKRSRL VSAKILPSDN LELTFAKTSG LHYTPTSILF 301: LHVPSISKLQ WHPFTITSSS NLEKDTLSVV IRKQGSWTQK LYTHLSSSID SLEVSTEGPY GPNSFDVSRH DSLILVGGGS GVTPFISVIR ELIFQSQNRS 401: TKLPNVLLVC AFKNYHDLAF LDLIFPSDIS VSDISKLNLR IEAYITREDK KPETTDDHKL LQTKWFKPQP LDSPISPVLG PNNFLWLGVV ILSSFVMFLL 501: LIGIVTRYYI YPVDHNTGSI YNFTYRVLWV MFLGCVCIFI SSSIIFLWRK KENKEGDKDS KKQVQSVEFQ TPTSSPGSWF HGHERELESV PYQSIVQATS 601: VHFGSKPNLK KILFEAEGSE DVGVMVCGPK KMRHEVAKIC SSGLAKNLHF EAISFNW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)