AT5G23210.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : serine carboxypeptidase-like 34 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3270 Blast hits to 3224 proteins in 265 species: Archae - 0; Bacteria - 14; Metazoa - 619; Fungi - 830; Plants - 1501; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7811625..7814837 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45728.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.96 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||
| Length | 403 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSKSMKRPGC SSIGFGAAEE LGPFFPQNSS QPKLKLNPYS WNKAANLLFL ESPVGVGFSY TNTSRDIKQL GDTVTARDSY NFLVNWFKRF PQYKSHDFYI 101: AGESYAGHYV PQLSELIYKE NKIASKKDFI NLKGLMIGNA LLDDETDQKG MIEYAWDHAV ISDALYEKVN KNCDFKQKLV TKECNDALDE YFDVYKILDM 201: YSLYAPKCVP TSTNSSTSHS VAGNRPLPAF RSILRPRLIS HNEGWRRMAA GYDPCASEYT EKYMNRKDVQ EALHANVTNI SYPWTHCSDT VSFWSDAPAS 301: MLPTLRTLVS AGLRVWVFSG DTDGRIPVTA TRYSLKKLGL KIVQDWTPWY TKLQVGGWTV EYDGLMFVTV RGAGHQVPTF KPREALQLIH HFLGNKKLPT 401: FPF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)