AT5G22510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alkaline/neutral invertase | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alkaline/neutral invertase (INV-E); FUNCTIONS IN: beta-fructofuranosidase activity; INVOLVED IN: cotyledon development, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 679 Blast hits to 676 proteins in 97 species: Archae - 0; Bacteria - 134; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:7474974..7477479 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 69243.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 617 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAASETVLRV PLGSVSQSCY LASFFVNSTP NLSFKPVSRN RKTVRCTNSH EVSSVPKHSF HSSNSVLKGK KFVSTICKCQ KHDVEESIRS TLLPSDGLSS 101: ELKSDLDEMP LPVNGSVSSN GNAQSVGTKS IEDEAWDLLR QSVVFYCGSP IGTIAANDPN STSVLNYDQV FIRDFIPSGI AFLLKGEYDI VRNFILYTLQ 201: LQSWEKTMDC HSPGQGLMPC SFKVKTVPLD GDDSMTEEVL DPDFGEAAIG RVAPVDSGLW WIILLRAYGK CTGDLSVQER VDVQTGIKMI LKLCLADGFD 301: MFPTLLVTDG SCMIDRRMGI HGHPLEIQAL FYSALVCARE MLTPEDGSAD LIRALNNRLV ALNFHIREYY WLDLKKINEI YRYQTEEYSY DAVNKFNIYP 401: DQIPSWLVDF MPNRGGYLIG NLQPAHMDFR FFTLGNLWSI VSSLASNDQS HAILDFIEAK WAELVADMPL KICYPAMEGE EWRIITGSDP KNTPWSYHNG 501: GAWPTLLWQL TVASIKMGRP EIAEKAVELA ERRISLDKWP EYYDTKRARF IGKQARLYQT WSIAGYLVAK LLLANPAAAK FLTSEEDSDL RNAFSCMLSA 601: NPRRTRGPKK AQQPFIV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)