AT5G22080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G65280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:7310600..7313540 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29071.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.00 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.22 | ||||||||||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEVKVDDDA ILKSFLAEVG EVERDNEVGR ILSCFKLNPF EHLNLSFDSS TDDVKRQYRK ISLMVHPDKC KHPQAQEAFG ALAKAQQLLL NDQERDYILT 101: QVHAAKEELK MKRKKQLKKD TASKIKSLVD EGKHEHIYEQ SEEFQKELKL KVREILTDQE WRRRKMAMRI SEEEGRLKKD EAEQKEIWKK KREHEEQWEG 201: TREKRVSSWR DFQKAGKKAK KGETRPPKLK TEDPNKSYVQ RPVKKG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)