AT5G19500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tryptophan/tyrosine permease | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:6579019..6581699 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54360.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.95 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.67 | ||||||||||||||||||||||||||||||||
| Length | 505 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVSLSYTCL LRLPTFSVPT KPISFNGPLP FYLPRSHISS SCFGFKSNPF IRTQTPRFFK CLPQRVSDER RETQVTTEEE EEDEEEKIVV FERLFSNLNQ 101: STLKRESGSL SSAIFLVAGT TVGAGILAIP AVTQESGFLA SAVACILCWA FMVVTGLLVA EVNVNTMSEL GSGGVSLVSM AKRTLGSVGV QVVSWSYLLI 201: HYTLLVAYIA RSSGILTNFL GIPIWESATL FSLIFGGLCF FGSQRFIGAA NGVLVFGVIA SFAALVAVAS GDLHWEALLK ANFEAVPMSV PIIALSFVYQ 301: NVVPVLCTDL EGDLPRVRTA IVLGTAIPLG LFLVWDAVIL GSFPVDTGVA VEKMVDPLQQ LRSSSVTVGP FVEAFSLFAI ATSYIGFVLG LSDFFSDLLK 401: LPSGQNKPLL YLLTLVPPLV LSLLDPEIFF KALDFAGTYG VLVLFGILPA AMSWSDRYIV SSSTVTRLPQ LVPGGKLTLS LVMGAAGYVI ISEVIENLSK 501: YLNVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)