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AT5G18920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.584
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cox19-like CHCH family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cox19-like CHCH family protein; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J336eggNOG:ENOG410XXB9EMBL:CP002688EnsemblPlants:AT5G18920
EnsemblPlants:AT5G18920.1entrez:832010GeneID:832010Gramene:AT5G18920.1
hmmpanther:PTHR13639hmmpanther:PTHR13639:SF2InParanoid:F4JZJ5InterPro:IPR009069
KEGG:ath:AT5G18920KO:K18177OMA:ESNRNWKPaxDb:F4JZJ5
PRIDE:F4JZJ5Proteomes:UP000006548RefSeq:NP_197393.1SUPFAM:SSF47072
TAIR:AT5G18920UniGene:At.31359UniProt:F4JZJ5
Coordinates (TAIR10) chr5:+:6310095..6310623
Molecular Weight (calculated) 8952.39 Da
IEP (calculated) 5.11
GRAVY (calculated) -1.39
Length 77 amino acids
Sequence (TAIR10)
(BLAST)
1: MEKVTENPNS ETQPSPPPPP NHQMDADDDD ENVKQLKECS SLYLSLQDCL VDSNRDWKSC QKHVQALKEC HERRMKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)