AT5G17040.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 8109 Blast hits to 8057 proteins in 479 species: Archae - 2; Bacteria - 528; Metazoa - 2521; Fungi - 38; Plants - 4841; Viruses - 115; Other Eukaryotes - 64 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:5605358..5606963 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 48549.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.20 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 442 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MANSHVAVLA FPFGSHGQAI LAVTRRLATA APSTVFSFLN TSQSNFSLLS SDLPPNIRVH DVSDGVPEGY VLSRNPQEAV ELFLEAAPEI FRRELAVAET 101: EVGRKVTCML TDAFIWFAGD MAAEMKVSWV AFWTSGTRSL LISTQISSEK QSLSKETLGC ISGMEKIRVK DTPEGVVFGN LDSVFSKMLH QMGLALPRAT 201: TVYMNSFEEL DPTLTDNLRL KFKRYLSIGP LALLFSTSQR ETPLHDPHGC LAWIKKRSTA SVVYIAFGRV MTPPPGELVV VAQGLESSKV PFVWSLQEKN 301: MVHLPKGFLD GTREQGMVVP WAPQVELLNH EAMGVFVSHG GWNSVLESVS AGVPMICRPI FGDHALNARS VEAVWEIGMT ISSGVFTKDG FEESLDRVLV 401: QDDGKKMKFN AKKLKELAQE AVSTEGSSFE NFKGLLDEVM KV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)