AT5G14990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.597 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to 6001 proteins in 578 species: Archae - 107; Bacteria - 678; Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16; Other Eukaryotes - 2578 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:4850764..4853003 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 77520.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.52 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||
| Length | 666 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKDIMKEVEG KVKFSMADST MMLLVQQAMD KAHEKIKTKH GLLLRLNAIS IFYELAVIQL ESCLSFVGQE TDKLESNHEE VVRDLREIKD RLHHRLLETE 101: IAILEKDRQL LEMSENQESL RNVLESKETE LVHLQDLERK RFHSKIGDFI KEDEFSELKS SVDQQVMNLR QKLETEYDEL RGETEDPSAV DIDVLKGTMD 201: LAFNKMHHAI FLSELGPIEQ SWRWSIERDS MALLIKGFMN GLEEKMEKVM IVVKDYESGF KDRVGSIRRE LECLESQSDQ IIVHRSSSPR SCVATAATIS 301: SSSSIDNEIG DDKEAKEDRE EEQDSSNFPV SKLIKSHESI IRRKSEELAP PKIESIKRQK SCNGSSSKRA IDDIVSGLDS LMSLNTKLFE HLFDDDDGDR 401: HEHHPEVVMD DNLDDVWMKM QKNNSVFSDN AIEEKEDTEI RLMILEDTYL TLLKGLKADE ITNNRKAEEE EEEIKSEKIE SEVKCMDCLE NLNREKDYEI 501: LLEDEEFRQE LSWIIVTELL REVSETVENH EKIEANNKRV IEEEVNRACL EISLLYDDFD FKIQEKLKMV TFRLQNLEIK IDSTMDFIAE LRQRESVYRT 601: AFVLRSENLR KAETEVDLLG DQVDSLVKLL QKTLWTFHQH PLLLCNNSDI LEISKMIKKE LLSEDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)