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AT5G14980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19290.1); Has 3141 Blast hits to 3138 proteins in 1076 species: Archae - 24; Bacteria - 2044; Metazoa - 145; Fungi - 150; Plants - 435; Viruses - 33; Other Eukaryotes - 310 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2267eggNOG:KOG1455EMBL:AL391146EMBL:CP002688
EMBL:DQ056679EnsemblPlants:AT5G14980EnsemblPlants:AT5G14980.1entrez:831350
ESTHER:arath-F2G14.100Gene3D:3.40.50.1820GeneID:831350Gramene:AT5G14980.1
hmmpanther:PTHR11614hmmpanther:PTHR11614:SF101HOGENOM:HOG000003228InterPro:IPR022742
InterPro:IPR029058KEGG:ath:AT5G14980MEROPS:S33.A25OMA:AMCSISH
Pfam:PF12146PhylomeDB:Q9LFQ7PIR:T51443Proteomes:UP000006548
Reactome:R-ATH-1482883Reactome:R-ATH-426048RefSeq:NP_197002.1SMR:Q9LFQ7
STRING:3702.AT5G14980.1SUPFAM:SSF53474TAIR:AT5G14980UniGene:At.54847
UniProt:Q9LFQ7
Coordinates (TAIR10) chr5:+:4849600..4850583
Molecular Weight (calculated) 36438.60 Da
IEP (calculated) 7.92
GRAVY (calculated) -0.08
Length 327 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLHPVSEAN ASSPFGSLSA AEFYSRHSVT HSSAYVTNPT GLKLFTQWWT PLNRPPLGLI AVVHGFTGES SWFLQLTSVL FAKSGYLTCA IDHQGHGFSD
101: GLTAHIPNIN LIVDDCISFF DDFRKRHASS FLPAFLYSES LGGAIALYIT LRQKHQWNGL ILSGAMCSIS HKFKPPWPLQ HLLTLAATLI PTWRVVPTRG
201: SIAGVSFKEP WKRKLAYANP NRTVGKPRAA TAYELVRVCE DLQNRFEEVE VPLMIVHGRD DVVCDPASVE ELYRRCSSRD KTIKIYPGMW HQLIGESEEN
301: VDLVFGDVLD WIKTRSEIST IHGGTKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)