AT5G14980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19290.1); Has 3141 Blast hits to 3138 proteins in 1076 species: Archae - 24; Bacteria - 2044; Metazoa - 145; Fungi - 150; Plants - 435; Viruses - 33; Other Eukaryotes - 310 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:4849600..4850583 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36438.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.92 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||
| Length | 327 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLHPVSEAN ASSPFGSLSA AEFYSRHSVT HSSAYVTNPT GLKLFTQWWT PLNRPPLGLI AVVHGFTGES SWFLQLTSVL FAKSGYLTCA IDHQGHGFSD 101: GLTAHIPNIN LIVDDCISFF DDFRKRHASS FLPAFLYSES LGGAIALYIT LRQKHQWNGL ILSGAMCSIS HKFKPPWPLQ HLLTLAATLI PTWRVVPTRG 201: SIAGVSFKEP WKRKLAYANP NRTVGKPRAA TAYELVRVCE DLQNRFEEVE VPLMIVHGRD DVVCDPASVE ELYRRCSSRD KTIKIYPGMW HQLIGESEEN 301: VDLVFGDVLD WIKTRSEIST IHGGTKA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)