AT5G14930.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.767 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : senescence-associated gene 101 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes an acyl hydrolase involved in senescence . | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
senescence-associated gene 101 (SAG101); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G52430.1); Has 224 Blast hits to 223 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:4828754..4830165 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26211.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.05 | ||||||||||||||||||||||||||||||||
| Length | 239 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESSSSLKGS ALGKLVVTSG LLHSSWSKIL EIHNPPYSNH DPGLQVSKKK KDSGLEFQIH REEKFTLVVF SAPPICRSSS SDSTLLHVKD KENPFPFLCS 101: ENNPSFSLHT PAFNLFTSAS TSLTYLKSEL LQTLKSEKPV IITGAALGGS VASLYTLWLL ETIEPTLKRP LCITFGSPLI GDASLQQILE NSVRNSCFLH 201: VVSAQTRIKM DFFKPFGTFL ICFDSGCVCI EDHVAVTEV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)