AT5G14210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.612 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:4578503..4581374 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85582.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.59 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 775 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEQLKVLPLL FLSWVMFLQS THQLPNSQTQ VLYQLRKHLE FPKALESWGN YYGDLCQIPA TAHMSITCQG NSITELKVMG DKLFKPFGMF DGSSLPNHTL 101: SEAFIIDSFV TTLTRLTSLR VLSLVSLGIY GEFPGKIHRL NSLEYLDLSS NFLFGSVPPD ISRLVMLQSL MLDGNYFNGS VPDTLDSLTN LTVLSLKNNR 201: FKGPFPSSIC RIGRLTNLAL SHNEISGKLP DLSKLSHLHM LDLRENHLDS ELPVMPIRLV TVLLSKNSFS GEIPRRFGGL SQLQHLDLSF NHLTGTPSRF 301: LFSLPNISYL DLASNKLSGK LPLNLTCGGK LGFVDLSNNR LIGTPPRCLA GASGERVVKL GGNCLSIIGS HDQHQEFLCE EAETEGKQFQ GRKVGILIAV 401: IGGAVLVLVF FVLVILLLLC TNRCSSCCSR EKSVPQTRLK VVTDNSHTSL SSEVLASARL ISQTAKLGAQ GVPSCRSFSF EDLKEATDDF DSSRFLGEGS 501: LGKLYRGTLE NGSSIAIRCL VLSRKFSSQS IRGHLDWMAK LNHPHLLGFL GHCTQTSGEH DPVATILYLV YEYMPNGSYR THLSESFSEK ILTWPDRLAI 601: LIEIAKAVHF LHTGVMPGSF NNQLKTNNIL LDEHKIAKLS DYGVSAIIEE NEKLETKSET HKSKKKAKRE DDVYNFGFIL LESLIGPVPT TKGEAFLLNE 701: MTSFGSQDGR QKIVSPTVLT TSSQESLSIA ISIANKCVLL EPSARPSFED VLWNLQYAAQ MQSAADAERK SDTSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)