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AT5G13610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF155)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF155); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT1G69380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1723eggNOG:KOG2861EMBL:AB006704EMBL:AY127015
EMBL:BT000617EMBL:CP002688EnsemblPlants:AT5G13610EnsemblPlants:AT5G13610.1
entrez:831205GeneID:831205GO:GO:0005739GO:GO:0007005
GO:GO:0009738GO:GO:0016021GO:GO:0031930Gramene:AT5G13610.1
hmmpanther:PTHR16255hmmpanther:PTHR16255:SF6InterPro:IPR003734KEGG:ath:AT5G13610
OMA:KAYFPCTPfam:PF02582PhylomeDB:Q9FNB2Proteomes:UP000006548
RefSeq:NP_196865.1TAIR:AT5G13610TMHMM:TMhelixUniGene:At.32045
UniProt:Q9FNB2
Coordinates (TAIR10) chr5:+:4383073..4384808
Molecular Weight (calculated) 46203.40 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.22
Length 402 amino acids
Sequence (TAIR10)
(BLAST)
001: MMRSVDVYVK TLGPPVRSIL YSIFTSQQKP SSLPSLPFHF SLRSSSNIPT RCFSNVVAKS NSPIYDFQGF RNLFTERAIS SSTTTPVASA QPQQLQNQNQ
101: HPAEVDEEIS MGLEDEAKLS IPVRAYFFST SVDLRSLIEQ NKQNFIPPTS RMTNYVVLKF GNHSDPTDTT RGRISGSESI YMVVFHYGSI VLFNVREHEV
201: DEYLKVVERH ASGLLPEMRK DEYEVRENPN LDTWMEVGRD FIRLQFLNTD GIRTIGCVLG QSIALDYYGR QVDGMVAEFT EINRQLEITG TFTMKRKKLF
301: QLVGKANVIL ADVILKLGLF ERSDIAWKDA KYGQIWEFLR DEFELTQSFA NLDYKLKFVE HNVRFLQEIL QNRKSATLEW LIIILISMEI AISFYNMSRA
401: SL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)