AT5G11050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myb domain protein 64 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Member of R2R3-MYB transcription factor gene family. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myb domain protein 64 (MYB64); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: egg cell, female gametophyte; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 119 (TAIR:AT5G58850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3502144..3503635 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48088.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.38 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.90 | ||||||||||||||||||||||||||||||||||||||||
| Length | 423 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEQKIQEKS LAHGAAPPLT AVERFLNGQK NEALCFKKQE RSIDRPIVKT TRAIEIRNEN KENMMFGPRK EKNLAVIGEI VVKGAAKDYT CKDITKKQPY 101: KNIIKGQWTA DEDRKLIKLV MQHGERKWAV ISEKLEGRAG KQCRERWHNH LRPDIKKDSW SEEEERLLVE AHTRIGNKWA EIAKLIQGRT ENSIKNHWNA 201: TKRRQNSKRK HKRSKNADSN SDIDDLSPSA KRPRILEDYI KNIENNDKNN GENIMTTSGN NVLSTSNYDQ FNSEDSTSSL LDDPYDEELV FLKNIFENHS 301: LENINLSQGT EITQSSSSGF MIENPKPKPN LYNNTFGTHL GAMVTEPANS SHLASDIYLS DLLNGTASSS SSLTFLSSNN NEHAGENELL LPQANSTSER 401: REMDLIEMLS GSTQGSNIWF PLF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)