AT5G10710.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.937 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:3379619..3382648 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 34366.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.01 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||
| Length | 298 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEMIVSMDQ DIRLDTTRAR LSNLLKRHRE LSDRLTRDSD KTMLDRLNKE FEAARRSQSQ EVFQALVHME ADRKADNGNA GFSLVCHPEE RITYRVGNKV 101: ICCLDGSRIG IQFETSTAGE TYEVYHCVLE SKSFLEKMIV LEHTIPFFLP LSDLENDLLF SNAKKFIDNV GDLLQAYVDR KEQVRLIKEL FGHQISEIYH 201: SLPYHMIEFS MDDCDCKFVV SLRYGDLLCE LPTKVRILVW PMHHLSKKQC TSPGSPAIPV RLPFAEDAFR IQSLPEAYAE IMPNMPNEIR QLFQTSPS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)