AT5G09350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphatidylinositol 4-OH kinase beta2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta2. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta2 is 83% identical to PI-4kbeta1 encoded by At5g64070. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta1, leads to the formation of abnormal root hairs. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphatidylinositol 4-OH kinase beta2 (PI-4KBETA2); FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: phosphoinositide biosynthetic process, root hair cell tip growth, pollen tube growth; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 4-OH kinase beta1 (TAIR:AT5G64070.1); Has 7223 Blast hits to 5858 proteins in 401 species: Archae - 10; Bacteria - 146; Metazoa - 2545; Fungi - 1184; Plants - 443; Viruses - 52; Other Eukaryotes - 2843 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:2899365..2905610 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 126249.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1116 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MQMAQFLSLV RGDSIESPRE ITSPSNLISE SGSNGWLIRF FDSSFFCEWI AVSYLYKHQH SGVRDYLCNR MYTLPLSGIE SYLFQICYLM VHKPSPSLDK 0101: FVIDICAKSL KIALKVHWFL LAELEDSDDN EGISRIQEKC QIAATLVGEW SPLMRPHNEP STPGSKVLNK FLSSKQKLFS LTLSPPTQKS LLFSPTSGSN 0201: LQDDGSQLSA DDNKIFKRLI PSPKVRDALL FRKSADKEDE ECEKDGFFKR LLRDSRGEDD EQRSNSEGFF KRLLKDNKSE EEEISNNSEG FFKRLRSSKG 0301: DEEELTSSSD GFFKRLLRDN KGDEEELGAN SEGFFKKLLR DSKNEDEEPN ANTEGFFKKL FHESKNEDDK VSNAVDDEEK DGFLKKLFKE KFDEKRNGNE 0401: RNETDETVYT DETSGEDNGR EGFFKKLFKE KFEDKPNIGK ADDGNESEDD ESSEFSLFRR LFRRHPEDVK TTLPSENCSN GGFVESSPGT ENFFRKLFRD 0501: RDRSVEDSEL FGSKKYKEKC PGSPKPQNNT PSKKPPLPNN TAAQFRKGSY HESLEFVHAL CETSYDLVDI FPIEDRKTAL RESIAEINSH LAQAETTGGI 0601: CFPMGRGVYR VVNIPEDEYV LLNSREKVPY MICVEVLKAE TPCGAKTTST SLKLSKGGIP LANGDAFLHK PPPWAYPLST AQEVYRNSAD RMSLSTVEAI 0701: DQAMTHKSEV KLVNACLSVE THSNSNTKSV SSGVTGVLRT GLESDLEWVR LVLTADPGLR MESITDPKTP RRKEHRRVSS IVAYEEVRAA AAKGEAPPGL 0801: PLKGAGQDSS DAQPMANGGM LKAGDALSGE FWEGKRLRIR KDSIYGNLPG WDLRSIIVKS GDDCRQEHLA VQLISHFFDI FQEAGLPLWL RPYEVLVTSS 0901: YTALIETIPD TASIHSIKSR YPNITSLRDF FDAKFKENSP SFKLAQRNFV ESMAGYSLVC YLLQIKDRHN GNLLMDEEGH IIHIDFGFML SNSPGGVNFE 1001: SAPFKLTREL LEVMDSDAEG LPSEFFDYFK VLCIQGFLTC RKHAERIILL VEMLQDSGFP CFKGGPRTIQ NLRKRFHLSL TEEQCVSLVL SLISSSLDAW 1101: RTRQYDYYQR VLNGIR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)