AT5G09300.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G21400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:2884282..2886291 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45223.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.50 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||
| Length | 401 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWTLNVQVMD FPGGKVAFTP EIQFISESDK ERVPCYRVLD DNGQLITNSQ FVQVSEEVAV KIYSDMVTLQ IMDNIFYEAQ RQGRLSFYAT AIGEEAINIA 101: SAAALTPQDV IFPQYREPGV LLWRGFTLQE FANQCFGNKS DYGKGRQMPV HYGSNKLNYF TVSATIATQL PNAVGAAYSL KMDKKDACAV TYFGDGGTSE 201: GDFHAALNIA AVMEAPVLFI CRNNGWAIST PTSDQFRSDG VVVKGRAYGI RSIRVDGNDA LAMYSAVHTA REMAIREQRP ILIEALTYRV GHHSTSDDST 301: RYRSAGEIEW WNKARNPLSR FRTWIESNGW WSDKTESDLR SRIKKEMLEA LRVAEKTEKP NLQNMFSDVY DVPPSNLREQ ELLVRQTINS HPQDYPSDVP 401: L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)