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AT5G08660.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.929
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF668)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 342 Blast hits to 276 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 333; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUE3eggNOG:ENOG41106YQEMBL:AL590346EMBL:CP002688
EnsemblPlants:AT5G08660EnsemblPlants:AT5G08660.1entrez:830767GeneID:830767
GO:GO:0005739GO:GO:0005886Gramene:AT5G08660.1hmmpanther:PTHR31730
hmmpanther:PTHR31730:SF2HOGENOM:HOG000029557InterPro:IPR007700InterPro:IPR021864
KEGG:ath:AT5G08660ncoils:CoilOMA:INFGSEYPfam:PF05003
Pfam:PF11961PhylomeDB:Q9C5B1Proteomes:UP000006548RefSeq:NP_680154.2
TAIR:AT5G08660UniGene:At.45653UniProt:Q9C5B1
Coordinates (TAIR10) chr5:+:2814526..2817845
Molecular Weight (calculated) 72502.30 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.46
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSFCSKSLG INFGSEYSGS SVADDGREPD FGHSQPNGQT SLIVPGMRQL MVKDVKEQNQ LKDVFSFRER EAEDNFYDGI PTYTMAPSQK IRSAKSTQTA
101: VSKVTEASKL LGKAGLGRAK DVLDTLGSSM TDLSSGGFTS GVATKGNELG ILAFEVANTI VKSSNLIESL SKRNIEHLKG TILYSEGVQN LVSNDFDELL
201: RLVAADKRQE LQVFSGEVVR FGNRSKDFQW HNLQRYFDRI SKELTPQRQL KEDAVLVVDQ LMVLVQYTAE LYQELQVLYR LEKDYEQKRR EEENSANSSK
301: GDGLAILKTE LKAQRKVVKS LKKKSLWSRG FEEVMEKLVD IVHFLLLEIH NIFGGADDQP SKKGAAEYDK RLGPAGLALH YANIIVQIDT LVARASSITS
401: NARDSLYQSL PPGIKLALRS KIKSFNVDKE LSVTQIKDEM ERTLHWLVPV AGNTTKAHHG FGWVGEWANT GTDFTSKPSG GDILRIETLY HASKEKTEIY
501: ILGQIIWLQH LVTKAKSDAR GGPRLSSIKS PLDTTNQQLI SEPLSVPIVT DEEQKMLQEA SKRKRTPCVS KSQDFDSEYS RARKCDPLSK SSEYFRGVRR
601: SKSAAVKRYS SGFPLLDFAI DKEKVLDVID RVDVPRDYKA LLKEGSLSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)