AT5G08120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.592 ASURE: cytoskeleton What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : movement protein binding protein 2C | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:2600743..2602678 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37350.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.71 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.95 | ||||||||||||||||||||||||||||||||||||
| Length | 326 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYEQQQHFMD LQSDSGFGDD SSWLAGDDDL RLSPHQSAAG TNSGNENLDR RLLKDLVEMV PLIEHYMEHK ERSSFKRRGS MIYTKMPSKE SLSRRGRNAS 101: QTVPGRKKRD QEGNDDVMNN SREDDENAKA LAGAEKEEMS RLREQVNDLQ TKLSEKEEVL KSMEMSKNQV NEIQEKLEAT NRLVAEKDML IKSMQLQLSD 201: TKIKLADKQA ALEKTQWEAK TTGTRAIKLQ EQLDAVEGDI STFTRVFETL AKTDSKKPDR DYDAVPYEFD HLPYLDDVDE TDLRKMEEAR LAYVAAVNTA 301: KEREDEESLV MAAQARAYLQ SLAFTY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)