AT5G07600.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.760 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Oleosin family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
Oleosin family protein; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: glycine-rich protein 18 (TAIR:AT5G07520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:2404652..2405481 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 22090.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.99 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.49 | ||||||||||||||||||||||||
| Length | 230 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFSFLIFLLE VYKVVIAVVA SIVFFVFSGL TLAGTAVGLT VTTPLFIIFS PILVPATIAI TLLTTGFTTG GALGATAIAL IRRGMGVKSK NNIPAIGAPP 101: TMFAQFSLTP KINYEGTFKG SWGGKSSPQA TPNFSYGGTW TANWGGRSFT GKFGDQSGGG STAGGSTPEA AGAGAGAAAA GAGAAAAAGA AAAAVPGLGA 201: ASAGAGPGAG AGTPAPAPTG KAGKAGSKKK |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)