AT5G07150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2215820..2217983 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61670.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.87 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||
| Length | 553 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSDQRWRLL RPAFFIFFFL FFLPHNLTFG LCFNTEALAL MKFKERIEID PFGALVNWGE LSHCSWSGVV CSHDGRVVIL NLRDLSLQGT LAPELGNLTH 101: LKSLILRNNS FSGKVPEEVT ELQELEILDL CDNNFGQPFP FARRLLQISP PPSQPSPPSP MEEVPIDFPF FFAPPPQNIG ASPPTETQVI PNPSPVPPPP 201: AQPPPAQTPP PQLSEVPHAV NKKKSHKSKM YIIVGVLVGV LGVMAALVAF FFLWNQKVKL IKPWGETGSS GQLQDVVTTG VPKLKLAELE TACEDFSNII 301: GSTSSDATIY KGTLSTGSEI AVLAVASGSL QDWSEDHETQ FQEKRLSQVN HKNFLNVIGY CHEDEPFNRM LVFEYAPNGS LFEHLHDQDA EHLDWPMRLR 401: IVMGIAYCME HMHNLNPKPI SHTNLNSSSV YLATDYAAKV SDFTFLSSTP LDPMTNVSSF GALLQEIITG KIPDPDSLLQ EETKPVADPT LKSFQEEVME 501: RVWEVVKECL SQKVEMKEVV VKLREITGIT PEAALPSRSP AWWAELEIIS TEM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)