AT5G04690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.345 golgi 0.283 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ankyrin repeat family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G04700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:1349781..1352525 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70625.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.61 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||
| Length | 625 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSNQLGEAL EETSERIPFK FAKTKFFHGV LQVSSEESSS PIKEVPEEEA PCDQFNLQIR TASQLHGRVT NEYYEYIQLN QGISQGRVEA VKDFLNRRPD 101: AVDKYINPYE TPLLKACAYG NPEIVKLLLR RMTPEQMLPK MSQNNFYNTP LTVVAVSGNM EIAEALVAKN PKLLEIPGNN GEIPVVVAVE NTQMEMARYL 201: YNRTPVQVLL EKDGFHGILL FLNAIYYKKL DMALDLFNKS RRLAVTKHLR IESVPIIVLA SKPDLFPDTL MGKVLKCLSK CIGIDEVYRL KVMHLQAKKL 301: LKGISEETLA LGLKERSESV DEALLFAVRY GNVDFLVEMI KNNSELLWST GTSTLFNTAV QVRQEKVFSL LYGLGDRKYL FLADKDSDGN SVLHLAGYPP 401: PNYKLATVVS ATLQMQRELQ WFKEMERIVP AIENERVNTE NLTPIEIFRK EHEAMRLEAE KWMKDTAMSC SLVAALIVTV TFAAIFTVPG GTDDNSGGRP 501: FHRHERIFVI FIVSDLISCF AACTSVLIFL GILTARYAFD DFLFSLPANM IAGLSTLFVS IAAMLVAFSS ALFTIFNDPW IVAPTIFFAC FPALLFVMIQ 601: YPLLKELIFS TYGKRIFDRN MKSLF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)