AT5G04630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.695 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 77, subfamily A, polypeptide 9 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP77A | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 77, subfamily A, polypeptide 9 (CYP77A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:1330578..1332107 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57781.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 509 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLDISNYVFF FFTLVTILLS CLVYILTRHS HNPKCANLPP GPKGWPVVGN LLQFARSGKQ FFEYVDEMRN IYGPIFTLKM GIRTMIIISD ANLAHQALIE 101: RGAQFATRPA ETPTRKIFSS SDITVHSAMY GPVWRSLRRN MVQNMLCSNR LKEFGSIRKS AIDKLVEKIK SEAKENDGLV WVLRNARFAA FCILLDMCFG 201: VKMEEESIEK MDQMMTEILT AVDPRIHDYL PILTPFYFKE RKNSLELRRK LVQFVVGFIE KRRLAIRNLG SDKTASSFAY LDTLFDLRVD GRETSPSDED 301: LVTLCSEFLN AGTDTTGTAI EWGIAELISN PKIQSRLYDE IKSTVGDDRT VEEKDLNKMV FLQAFVKELL RRHPPTYFTL THGVTEPTNL AGYDIPVGAN 401: VEFYLPGISE DPKIWSKPEK FDPDRFITGG EDADLTGVAG VKMMPFGIGR RICPGLGMAV VHVELMLSRM VQEFEWSSYP PESQVDFTGK LVFAVVMKNP 501: LRARVKARV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)