AT5G04610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.850 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: shoot apex, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G31740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:1325612..1326916 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48488.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.70 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||
| Length | 434 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALDVRIFEK TSPSRFISFT IPNPNSPIHL LRVAVLDSPV HSTESSPPRV AAILVPKHRE SDWIFSTESG QLQLLLNMPE ISRLILIGDD HDTDSDLPAV 101: YHRPNGEDDE SEKLEIRLKP LVVALLPKTL TREEIDDVPF LIYDDNVVSS VEIEKCVGPF VGEMLIEDVE IEIDDGVREF RRRLRFKRMP NLVQSAIKII 201: PRSCSNPSLP LMGTEFKLDL TELVHPYLAP MVASLSLIGS DVYDHLKSKP KALCIGVGGG GLLSFLRLQL GFEVTGVEID PEVLRIARQY FGLEESLARV 301: HVEDGIEFLK RLSKSCDDDA RFDVLMVDLD STDPIHGMTA PPVEFVAKDV LLAARTVLVP SGVFIINVIP PNKTFYQELQ DQFRHVFAEL YEIDVGNGEN 401: FVLIATVAPR KSGFNRENLT PAVSGKYLDA IQKI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)