AT5G03620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:918738..921874 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82599.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.70 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 766 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSNQRVRLF MLCFCLVNNA VIAATEDENV ERKPYIVYMG EATENSLVEA AENHHNLLMT VIGDESKARE LKIYSYGKNI NGFVARLFPH EAEKLSREEG 101: VVSVFKNTQR QLHTTRSWDF LGLVESKYKR SVGIESNIIV GVLDTGIDVE SPSFNDKGVG PPPAKWKGKC VTGNNFTRCN NKVIGAKYFH IQSEGLPDGE 201: GDTAADHDGH GTHTSSTIAG VSVSSASLFG IANGTARGGV PSARIAAYKV CWDSGCTDMD MLAAFDEAIS DGVDIISISI GGASLPFFED PIAIGAFHAM 301: KRGILTTCSA GNNGPGLFTV SNLAPWVMTV AANSLDRKFE TVVKLGNGLT ASGISLNGFN PRKKMYPLTS GSLASNLSAG GYGEPSTCEP GTLGEDKVMG 401: KVVYCEAGRE EGGNGGQGQD HVVRSLKGAG VIVQLLEPTD MATSTLIAGS YVFFEDGTKI TEYINSTKNP QAVIFKTKTT KMLAPSISSF SARGPQRISP 501: NILKPDISAP GLNILAAYSK LASVTGYPDD NRRTLFSIMS GTSMACPHAA AAAAYVKSFH PDWSPAAIKS ALMTTATPMR IKGNEAELSY GSGQINPRRA 601: IHPGLVYDIT EDAYLRFLCK EGYNSTSIGL LTGDNSNNTT KKEYNCENIK RGLGSDGLNY PSLHKQVNST EAKVSEVFYR TVTNVGYGPS TYVARVWAPK 701: GLRVEVVPKV MSFERPKEKR NFKVVIDGVW DETMKGIVSA SVEWDDSRGH LVRSPILLFR SDNDYR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)