AT5G03540.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.909 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : exocyst subunit exo70 family protein A1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:889606..893916 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75679.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.94 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||
| Length | 664 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVDSRMDLL SERAVLMRAS LQKSQTITDN VVSILGSFDS RLSALETAMR PTQIRTHAIR KAHENIDRTL KAAEVILSQF DLLRQAETKV LKGPHEDLES 101: YLDAIAQLRK IIRYFMSNKS FKSSDGVLNH ANSLLAKAQS KLEEEFKQLL ASYRILRMTF YLNYRSCHLT KIFFCEIKHF KAVEPDRLFD GLPNSLRPSS 201: DGDGGGKPHG GHHNDDAETA AYTLPILIPS RVLPLLHDLA QQMVQAGHQQ QLLQIYRDTR SFVLEESLKK LGVEKLSKED VQRMQWEVLE AKIGNWIHFM 301: RIAVKLLFAG ERQVCDQIFR GFDSLSDQCF AEVTVSSVSM LLSFGDAIAR SKRSPEKLFV LLDMYEIMRE LHTEIETIFK GKACLEIRDS ATGLTKRLAQ 401: TAQETFGDFE EAVEKDATKT AVLDGTVHPL TSYVINYVKF LFDYQTTLKQ LFLEFGNGDD SNSQLASVTM RIMQALQNNL DGKSKQYKDP ALTHLFLMNN 501: IHYMVRSVRR SEAKDLLGDD WVQRHRRIVQ QHANQYKRVA WTKILQSSSA QGLTSSGGGS LEGGNSSGVS RGLLKERFKM FNMQFDELHQ RQSQWTVPDT 601: ELRESLRLAV AEVLLPAYRS FLKRFGPLVE SGKNPQKYIK YTAEDLERLL GELFEGKSMN EPRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)