AT5G03435.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.945 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Ca2+dependent plant phosphoribosyltransferase family protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Ca2+dependent plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Ca2+dependent plant phosphoribosyltransferase family protein (TAIR:AT3G61720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:853365..855693 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 85046.60 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.46 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||
Length | 745 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAANKDEFSV KQISPKLGGE RGARNPYGPT SLHDLVEQME FLYVDVIRAI KNSDVDPGPC DPVVEITLGN YKSSTKDLPV GPNMDWNQVF AFDKTKGDVL 101: SVTLKDRLTN TVINKSNFKL ASEIPTRAPP DARIAPQRYP LRNTKTGFYL MMSVWFGTQV DEVYPVAWFS DASEVSTCVI NTRPKVYLAP RLCYVRVTIV 201: SGHDLISTDR NRTPSVYVTA TLGQVTLKTE VSSGTNPSWN KDLIFVASEP LEGTVYIRLI DRVDDQHEER IIGKLEKKLS EMTPLKVPSS APALFYDIEV 301: EPAGDSRRFA SRLKMKLATD QAYHVAEESI QYSSDYRPFV KGLWPCLLGK LEIGILGATG LKGSDERKQG IDSYVVAKYG NKWARTRTVV NSVTPKWNEQ 401: YSWDDYEKCT VLTLGIYDNR QIFKEDQAND VPIGKVRISL NRVESDWIYA CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR WLLPKAHYKS 501: PLSVYQIEEM RAEAVKINCA NLARTEPALR NEVVWDMLKP KTNTRYSTCD MRKVAALAFF DLFLYWPSLI VWLAIYLVVV PCIVLVGLSG LHKFLTRKFW 601: NKRENPRSPL IVNDLKLWKL ESPNLDELEE EFDSFPSSVS DVNILRMRYD RIRMVCQRPM ILLGDAASQG ERLYALLTFN GDDQLASFYC WLICVLVALC 701: WYNIPMWLWS LYPIAYWLNF TPLRNDMPCG VSNFFRRLPT NEVLF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)