AT5G02270.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.970 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : non-intrinsic ABC protein 9 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of NAP subfamily | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
non-intrinsic ABC protein 9 (NAP9); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G03905.1). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:467269..469041 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40040.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.90 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 354 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY 101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKLEHGLI FDLCHIPNLR ALHCLEYYYS VLDIDISWRL HKVSDGQRRR VQICMGLLKP 201: FKVLLLDEIT VDLDVLARAD LLKFLRKECE ERGATIIYAT HIFDGLEDWP THIVYVANGK LQLALPMEKV KETSKKSLMR TVESWLRKER DEERKRRKER 301: KANGLPEFET RTEESRVTGD PARMLNNGWA AGRLHSTVAG GEDNFVLSSN RVLR |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)