AT4G40080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.638 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ENTH/ANTH/VHS superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:18579371..18580542 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40704.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||
| Length | 365 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGRITSFADL IGRIKDKASQ SKAALVSSNT KSKTLSFHLS VLRATTHDPS TPPGNRHLAV ILSAGTGSRA TASSAVESIM ERLHTTGDAC VALKSLIIIH 101: HIVKHGRFIL QDQLSVFPAS GGRNYLKLSA FRDEKSPLMW ELSSWVRWYA LYLEHLLSTS RIMGFFISST SSTIHKEEYE EMVSSLTNSD LLREIDALVG 201: LLEEACKIPD LPFSGGKSLA DKITQLVGED YVSSINELYT RFNEFKERSN TLSFGDTIEL VCALKRLESC KERLSEICHG NWKRGWIDGF WGLVLEVKGI 301: IGNLEDNYGQ IEKSIVGFGK RDKGYESARF TDRLIIGYSN PVRFSSGRFS NVDRFNFPVS GRVLC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)