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AT4G38820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.646
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL035656EMBL:AL161594EMBL:BT010786EMBL:BT011279
EMBL:CP002687EnsemblPlants:AT4G38820EnsemblPlants:AT4G38820.1entrez:830037
GeneID:830037Gramene:AT4G38820.1KEGG:ath:AT4G38820PIR:T06081
Proteomes:UP000006548RefSeq:NP_195593.1TAIR:AT4G38820UniGene:At.43621
UniGene:At.75390UniProt:Q9T0J0
Coordinates (TAIR10) chr4:-:18121631..18121852
Molecular Weight (calculated) 8304.21 Da
IEP (calculated) 9.83
GRAVY (calculated) -0.16
Length 73 amino acids
Sequence (TAIR10)
(BLAST)
1: MYLQGKGWSS RPLDDQTQTL VQIYSTKLEM KAGSNMRLAL CIFSSGFLQR TLQETLLVSK LPLIDLERSS LRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)