AT4G38230.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : calcium-dependent protein kinase 26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Calcium Dependent Protein Kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17928994..17931101 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57622.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 514 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLALFSSDG KLIWKGSTQT GKRRPQEEAT MKHSGGNQAC YVLGQKTPSI RDLYSLGHKL GQGQFGTTYM CKEISTGREY ACKSITKRKL ISKEDVEDVR 101: REIQIMHHLA GYKNIVTIKG AYEDPLYVHI VMELCSGGEL FDRIIQRGHY SERKAAELIK IIVGVVEACH SLGVMHRDLK PENFLLVNKD DDFSLKAIDF 201: GLSVFFKPGQ IFEDVVGSPY YVAPEVLLKH YGPEADVWTA GVILYILVSG VPPFWAETQQ GIFDAVLKGH IDFDSDPWPL ISDSAKNLIR GMLCSRPSER 301: LTAHQVLRHP WICENGVAPD RALDPAVLSR LKQFSAMNKL KQMALRVIAE SLSEEEIAGL KEMFKAMDTD NSGAITFDEL KAGLRRYGST LKDTEIRDLM 401: EAADIDKSGT IDYGEFIAAT IHLNKLEREE HLLSAFRYFD KDGSGYITID ELQHACAEQG MSDVFLEDVI KEVDQDNDGR IDYGEFVAMM QKGIVGRTMR 501: KSINMSIRNN AVSQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)