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AT4G37840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.748
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : hexokinase-like 3
Curator
Summary (TAIR10)
Encodes a putative hexokinase.
Computational
Description (TAIR10)
hexokinase-like 3 (HKL3); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2260 Blast hits to 1998 proteins in 311 species: Archae - 0; Bacteria - 87; Metazoa - 1224; Fungi - 560; Plants - 263; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37840-MONOMEREC:2.7.1.1eggNOG:COG5026eggNOG:KOG1369
EMBL:AL035709EMBL:AL161592EMBL:CP002687EnsemblPlants:AT4G37840
EnsemblPlants:AT4G37840.1entrez:829940GeneID:829940Genevisible:Q9T071
GO:GO:0001678GO:GO:0004396GO:GO:0005524GO:GO:0005536
GO:GO:0005739GO:GO:0005829GO:GO:0006096GO:GO:0006970
GO:GO:0006974GO:GO:0006979GO:GO:0009408GO:GO:0009409
GO:GO:0009414GO:GO:0009651GO:GO:0010224GO:GO:0016021
GO:GO:0019158Gramene:AT4G37840.1gramene_pathway:2.7.1.2gramene_pathway:2.7.1.4
gramene_pathway:PWY-5661gramene_pathway:PWY-621gramene_pathway:PWY0-1182hmmpanther:PTHR19443
hmmpanther:PTHR19443:SF18HOGENOM:HOG000162670InParanoid:Q9T071InterPro:IPR001312
InterPro:IPR022672InterPro:IPR022673KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1
KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1KEGG:00521+2.7.1.1
KEGG:00524+2.7.1.1KEGG:ath:AT4G37840KO:K00844ncoils:Coil
OMA:VIIEHSHPANTHER:PTHR19443PaxDb:Q9T071Pfam:PF00349
Pfam:PF03727Pfam:Q9T071Pfscan:PS51748PhylomeDB:Q9T071
PIR:T06031PRIDE:Q9T071PRO:PR:Q9T071PROSITE:PS51748
ProteinModelPortal:Q9T071Proteomes:UP000006548Reactome:R-ATH-170822Reactome:R-ATH-70153
Reactome:R-ATH-70171RefSeq:NP_195497.1SMR:Q9T071STRING:3702.AT4G37840.1
SUPFAM:SSF53067TAIR:AT4G37840tair10-symbols:HKL3TMHMM:TMhelix
UniGene:At.54644UniProt:Q9T071
Coordinates (TAIR10) chr4:-:17790147..17792198
Molecular Weight (calculated) 54244.30 Da
IEP (calculated) 5.99
GRAVY (calculated) -0.12
Length 493 amino acids
Sequence (TAIR10)
(BLAST)
001: MTRKEVVLAV TAATITAVAA GVLMGRWIRR KERRLKHTQR ILRKFARECA TPVSKLWAVA DALVADMTAS LTAECCGSLN MLVSFTGSLP SGDEKGVHYG
101: VNLRGKELLL LRGTLGGNEE PISDVQKHEI PIPDDVLNGS FKELCDFISL ELVKFLAMNP GGEAEEVKNL GFTLTRSVEQ IGSHSISSIH RKSLANDDDE
201: KVLKDLVNDM NESLETHGLK IRMNTALVDN TIGELAGGRY YHKDTVAAVS LGMGTNAAYI EQAQEISRWK SAIREPQEIV VSTEWGDFRS CHLPITEFDA
301: SLDAESLNPG HRIFEKMVSG RYLGEIVRRV LLKMSEESAL FGDTLPPKLT IPYILWSPDM AAMHQDISEE RETVNKKLKE VFGIMDSTLA AREVVVEVCD
401: VVAERAARLA GAGIVGMIKK LGRLEKKMSI VIVEGGLYDH YRVFRNYLHS SVWEMLGDEL SDHVVIEHSH GGSAAGALFL AACGDGHQDS ESK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)