AT4G37340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 81, subfamily D, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP81D | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 81, subfamily D, polypeptide 3 (CYP81D3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 2 (TAIR:AT4G37360.1); Has 36513 Blast hits to 36368 proteins in 1854 species: Archae - 63; Bacteria - 6178; Metazoa - 11747; Fungi - 7453; Plants - 9512; Viruses - 3; Other Eukaryotes - 1557 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17564953..17566706 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55791.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.94 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 500 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGQTLIFTF LFISLSLTFI IGRIKRRPNL PPSPSWALPV IGHLRLLKPP LHRVFLSVSE SLGDAPIISL RLGNRLVFVV SSHSLAEECF TKNDVVLANR 101: FNSLASKHIS YGCTTVVTAS YGDHWRNLRR IGAVEIFSAH RLNSFSSIRR DEIHRLIACL SRNSSLEFTK VEMKSMFSNL TFNNIIRMLA GKCYYGDGAE 201: DDPEAKRVRE LIAEGMGCFG AGNTADYLPI LTWITGSEKR IKKIASRLDE FLQGLVDERR EGKEKRQNTM VDHLLCLQET QPEYYTDNII KGIMLSLILA 301: GTDTSAVTLE WTLSALLNHP QILSKARDEI DNKVGLNRLV EESDLSHLPY LQNIVSESLR LYPASPLLVP HVASEDCKVG GYHMPRGTML LTNAWAIHRD 401: PKIWDDPTSF KPERFEKEGE AQKLLGFGLG RRACPGSGLA QRLASLTIGS LIQCFEWERI GEEEVDMTEG GGGVIMPKAI PLVAMCKARP VVGKILNESA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)