AT4G36210.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.726 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF726) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 613 Blast hits to 567 proteins in 193 species: Archae - 6; Bacteria - 71; Metazoa - 129; Fungi - 237; Plants - 65; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17130951..17134302 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56254.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.68 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||
| Length | 516 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEQEMALAK AADAMVHSIQ CSVSIDAKKE KHQEYENECR EKYAVPEVKS KDVDLDKEKD KKEAAESAAR EGLEAGVVII DGSHKPEVLE NEKSVEEVTL 101: LSHQRKINVL YELLSACLSD KHHEDKKCKR CRKGYDARHR VALRLLATWF NIEWIKVEAI ETMVACSAMA IQKSAEMKGE DNLTPTTSWA KWKRGGIIGA 201: AAITGGTLMA ITGGLAAPAI AAGFGALAPT LGTIIPVIGA GGFAAAASAA GTVAGSVAVA ASFGAAGAGL TGTKMARRIG DLDEFEFKAI GENHNQGRLA 301: VEVLVAGVVF EEEDFVKPWE GLTSNLERYT LQWESKNLIL VSTAIQDWLT SRLAMELMKQ GAMHTVLASL LMALAWPATI LVAADFIDSK WSIAIDRSDK 401: AGRLLAEVLQ KGLQGNRYRF HDCCNEVNII SIFKSYMVAG RFINVYATND WTLGIAFRAS LISQGLAGIQ PICIPGIENV DVTDMVEGHS SYLWKTQQIL 501: ERLEIDTYYP VFRDTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)